Distinct biphasic mRNA changes in response to Asian soybean rust infection.
Identifieur interne : 001104 ( Main/Exploration ); précédent : 001103; suivant : 001105Distinct biphasic mRNA changes in response to Asian soybean rust infection.
Auteurs : Martijn Van De Mortel [États-Unis] ; Justin C. Recknor ; Michelle A. Graham ; Dan Nettleton ; Jaime D. Dittman ; Rex T. Nelson ; Cláudia V. Godoy ; Ricardo V. Abdelnoor ; Alvaro M R. Almeida ; Thomas J. Baum ; Steven A. WhithamSource :
- Molecular plant-microbe interactions : MPMI [ 0894-0282 ] ; 2007.
Descripteurs français
- KwdFr :
- ARN messager (métabolisme), Analyse de profil d'expression de gènes (MeSH), Analyse de regroupements (MeSH), Basidiomycota (physiologie), Facteurs de transcription (génétique), Facteurs de transcription (métabolisme), Génotype (MeSH), Immunité innée (génétique), Maladies des plantes (génétique), Soja (génétique), Soja (microbiologie), Soja (métabolisme), Séquençage par oligonucléotides en batterie (MeSH).
- MESH :
- génétique : Facteurs de transcription, Immunité innée, Maladies des plantes, Soja.
- microbiologie : Soja.
- métabolisme : ARN messager, Facteurs de transcription, Soja.
- physiologie : Basidiomycota.
- Analyse de profil d'expression de gènes, Analyse de regroupements, Génotype, Séquençage par oligonucléotides en batterie.
English descriptors
- KwdEn :
- Basidiomycota (physiology), Cluster Analysis (MeSH), Gene Expression Profiling (MeSH), Genotype (MeSH), Immunity, Innate (genetics), Oligonucleotide Array Sequence Analysis (MeSH), Plant Diseases (genetics), RNA, Messenger (metabolism), Soybeans (genetics), Soybeans (metabolism), Soybeans (microbiology), Transcription Factors (genetics), Transcription Factors (metabolism).
- MESH :
- chemical , genetics : Transcription Factors.
- chemical , metabolism : RNA, Messenger, Transcription Factors.
- genetics : Immunity, Innate, Plant Diseases, Soybeans.
- metabolism : Soybeans.
- microbiology : Soybeans.
- physiology : Basidiomycota.
- Cluster Analysis, Gene Expression Profiling, Genotype, Oligonucleotide Array Sequence Analysis.
Abstract
Asian soybean rust (ASR), caused by Phakopsora pachyrhizi, is now established in all major soybean-producing countries. Currently, there is little information about the molecular basis of ASR-soybean interactions, which will be needed to assist future efforts to develop effective resistance. Toward this end, abundance changes of soybean mRNAs were measured over a 7-day ASR infection time course in mock-inoculated and infected leaves of a soybean accession (PI230970) carrying the Rpp2 resistance gene and a susceptible genotype (Embrapa-48). The expression profiles of differentially expressed genes (ASR-infected compared with the mock-inoculated control) revealed a biphasic response to ASR in each genotype. Within the first 12 h after inoculation (hai), which corresponds to fungal germination and penetration of the epidermal cells, differential gene expression changes were evident in both genotypes. mRNA expression of these genes mostly returned to levels found in mock-inoculated plants by 24 hai. In the susceptible genotype, gene expression remained unaffected by rust infection until 96 hai, a time period when rapid fungal growth began. In contrast, gene expression in the resistant genotype diverged from the mock-inoculated control earlier, at 72 h, demonstrating that Rpp2-mediated defenses were initiated prior to this time. These data suggest that ASR initially induces a nonspecific response that is transient or is suppressed when early steps in colonization are completed in both soybean genotypes. The race-specific resistance phenotype of Rpp2 is manifested in massive gene expression changes after the initial response prior to the onset of rapid fungal growth that occurs in the susceptible genotype.
DOI: 10.1094/MPMI-20-8-0887
PubMed: 17722693
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Abdelnoor</name></author><author><name sortKey="Almeida, Alvaro M R" sort="Almeida, Alvaro M R" uniqKey="Almeida A" first="Alvaro M R" last="Almeida">Alvaro M R. Almeida</name></author><author><name sortKey="Baum, Thomas J" sort="Baum, Thomas J" uniqKey="Baum T" first="Thomas J" last="Baum">Thomas J. Baum</name></author><author><name sortKey="Whitham, Steven A" sort="Whitham, Steven A" uniqKey="Whitham S" first="Steven A" last="Whitham">Steven A. 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Recknor</name></author><author><name sortKey="Graham, Michelle A" sort="Graham, Michelle A" uniqKey="Graham M" first="Michelle A" last="Graham">Michelle A. Graham</name></author><author><name sortKey="Nettleton, Dan" sort="Nettleton, Dan" uniqKey="Nettleton D" first="Dan" last="Nettleton">Dan Nettleton</name></author><author><name sortKey="Dittman, Jaime D" sort="Dittman, Jaime D" uniqKey="Dittman J" first="Jaime D" last="Dittman">Jaime D. Dittman</name></author><author><name sortKey="Nelson, Rex T" sort="Nelson, Rex T" uniqKey="Nelson R" first="Rex T" last="Nelson">Rex T. Nelson</name></author><author><name sortKey="Godoy, Claudia V" sort="Godoy, Claudia V" uniqKey="Godoy C" first="Cláudia V" last="Godoy">Cláudia V. Godoy</name></author><author><name sortKey="Abdelnoor, Ricardo V" sort="Abdelnoor, Ricardo V" uniqKey="Abdelnoor R" first="Ricardo V" last="Abdelnoor">Ricardo V. Abdelnoor</name></author><author><name sortKey="Almeida, Alvaro M R" sort="Almeida, Alvaro M R" uniqKey="Almeida A" first="Alvaro M R" last="Almeida">Alvaro M R. Almeida</name></author><author><name sortKey="Baum, Thomas J" sort="Baum, Thomas J" uniqKey="Baum T" first="Thomas J" last="Baum">Thomas J. Baum</name></author><author><name sortKey="Whitham, Steven A" sort="Whitham, Steven A" uniqKey="Whitham S" first="Steven A" last="Whitham">Steven A. Whitham</name></author></analytic><series><title level="j">Molecular plant-microbe interactions : MPMI</title><idno type="ISSN">0894-0282</idno><imprint><date when="2007" type="published">2007</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Basidiomycota (physiology)</term><term>Cluster Analysis (MeSH)</term><term>Gene Expression Profiling (MeSH)</term><term>Genotype (MeSH)</term><term>Immunity, Innate (genetics)</term><term>Oligonucleotide Array Sequence Analysis (MeSH)</term><term>Plant Diseases (genetics)</term><term>RNA, Messenger (metabolism)</term><term>Soybeans (genetics)</term><term>Soybeans (metabolism)</term><term>Soybeans (microbiology)</term><term>Transcription Factors (genetics)</term><term>Transcription Factors (metabolism)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN messager (métabolisme)</term><term>Analyse de profil d'expression de gènes (MeSH)</term><term>Analyse de regroupements (MeSH)</term><term>Basidiomycota (physiologie)</term><term>Facteurs de transcription (génétique)</term><term>Facteurs de transcription (métabolisme)</term><term>Génotype (MeSH)</term><term>Immunité innée (génétique)</term><term>Maladies des plantes (génétique)</term><term>Soja (génétique)</term><term>Soja (microbiologie)</term><term>Soja (métabolisme)</term><term>Séquençage par oligonucléotides en batterie (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Transcription Factors</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>RNA, Messenger</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Immunity, Innate</term><term>Plant Diseases</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Facteurs de transcription</term><term>Immunité innée</term><term>Maladies des plantes</term><term>Soja</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Soja</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>ARN messager</term><term>Facteurs de transcription</term><term>Soja</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Basidiomycota</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Basidiomycota</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Cluster Analysis</term><term>Gene Expression Profiling</term><term>Genotype</term><term>Oligonucleotide Array Sequence Analysis</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de profil d'expression de gènes</term><term>Analyse de regroupements</term><term>Génotype</term><term>Séquençage par oligonucléotides en batterie</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Asian soybean rust (ASR), caused by Phakopsora pachyrhizi, is now established in all major soybean-producing countries. Currently, there is little information about the molecular basis of ASR-soybean interactions, which will be needed to assist future efforts to develop effective resistance. Toward this end, abundance changes of soybean mRNAs were measured over a 7-day ASR infection time course in mock-inoculated and infected leaves of a soybean accession (PI230970) carrying the Rpp2 resistance gene and a susceptible genotype (Embrapa-48). The expression profiles of differentially expressed genes (ASR-infected compared with the mock-inoculated control) revealed a biphasic response to ASR in each genotype. Within the first 12 h after inoculation (hai), which corresponds to fungal germination and penetration of the epidermal cells, differential gene expression changes were evident in both genotypes. mRNA expression of these genes mostly returned to levels found in mock-inoculated plants by 24 hai. In the susceptible genotype, gene expression remained unaffected by rust infection until 96 hai, a time period when rapid fungal growth began. In contrast, gene expression in the resistant genotype diverged from the mock-inoculated control earlier, at 72 h, demonstrating that Rpp2-mediated defenses were initiated prior to this time. These data suggest that ASR initially induces a nonspecific response that is transient or is suppressed when early steps in colonization are completed in both soybean genotypes. The race-specific resistance phenotype of Rpp2 is manifested in massive gene expression changes after the initial response prior to the onset of rapid fungal growth that occurs in the susceptible genotype.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">17722693</PMID><DateCompleted><Year>2007</Year><Month>12</Month><Day>20</Day></DateCompleted><DateRevised><Year>2008</Year><Month>11</Month><Day>21</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0894-0282</ISSN><JournalIssue CitedMedium="Print"><Volume>20</Volume><Issue>8</Issue><PubDate><Year>2007</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Molecular plant-microbe interactions : MPMI</Title><ISOAbbreviation>Mol Plant Microbe Interact</ISOAbbreviation></Journal><ArticleTitle>Distinct biphasic mRNA changes in response to Asian soybean rust infection.</ArticleTitle><Pagination><MedlinePgn>887-99</MedlinePgn></Pagination><Abstract><AbstractText>Asian soybean rust (ASR), caused by Phakopsora pachyrhizi, is now established in all major soybean-producing countries. Currently, there is little information about the molecular basis of ASR-soybean interactions, which will be needed to assist future efforts to develop effective resistance. Toward this end, abundance changes of soybean mRNAs were measured over a 7-day ASR infection time course in mock-inoculated and infected leaves of a soybean accession (PI230970) carrying the Rpp2 resistance gene and a susceptible genotype (Embrapa-48). The expression profiles of differentially expressed genes (ASR-infected compared with the mock-inoculated control) revealed a biphasic response to ASR in each genotype. Within the first 12 h after inoculation (hai), which corresponds to fungal germination and penetration of the epidermal cells, differential gene expression changes were evident in both genotypes. mRNA expression of these genes mostly returned to levels found in mock-inoculated plants by 24 hai. In the susceptible genotype, gene expression remained unaffected by rust infection until 96 hai, a time period when rapid fungal growth began. In contrast, gene expression in the resistant genotype diverged from the mock-inoculated control earlier, at 72 h, demonstrating that Rpp2-mediated defenses were initiated prior to this time. These data suggest that ASR initially induces a nonspecific response that is transient or is suppressed when early steps in colonization are completed in both soybean genotypes. The race-specific resistance phenotype of Rpp2 is manifested in massive gene expression changes after the initial response prior to the onset of rapid fungal growth that occurs in the susceptible genotype.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>van de Mortel</LastName><ForeName>Martijn</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Iowa State University, Ames 50011, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Recknor</LastName><ForeName>Justin C</ForeName><Initials>JC</Initials></Author><Author ValidYN="Y"><LastName>Graham</LastName><ForeName>Michelle A</ForeName><Initials>MA</Initials></Author><Author ValidYN="Y"><LastName>Nettleton</LastName><ForeName>Dan</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Dittman</LastName><ForeName>Jaime D</ForeName><Initials>JD</Initials></Author><Author ValidYN="Y"><LastName>Nelson</LastName><ForeName>Rex T</ForeName><Initials>RT</Initials></Author><Author ValidYN="Y"><LastName>Godoy</LastName><ForeName>Cláudia V</ForeName><Initials>CV</Initials></Author><Author ValidYN="Y"><LastName>Abdelnoor</LastName><ForeName>Ricardo V</ForeName><Initials>RV</Initials></Author><Author ValidYN="Y"><LastName>Almeida</LastName><ForeName>Alvaro M R</ForeName><Initials>AM</Initials></Author><Author ValidYN="Y"><LastName>Baum</LastName><ForeName>Thomas J</ForeName><Initials>TJ</Initials></Author><Author ValidYN="Y"><LastName>Whitham</LastName><ForeName>Steven A</ForeName><Initials>SA</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Mol Plant Microbe Interact</MedlineTA><NlmUniqueID>9107902</NlmUniqueID><ISSNLinking>0894-0282</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012333">RNA, Messenger</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014157">Transcription Factors</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D016000" MajorTopicYN="N">Cluster Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020869" MajorTopicYN="N">Gene Expression Profiling</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007113" MajorTopicYN="N">Immunity, Innate</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020411" MajorTopicYN="N">Oligonucleotide Array Sequence Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013025" MajorTopicYN="N">Soybeans</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014157" MajorTopicYN="N">Transcription Factors</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2007</Year><Month>8</Month><Day>29</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2007</Year><Month>12</Month><Day>21</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2007</Year><Month>8</Month><Day>29</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">17722693</ArticleId><ArticleId IdType="doi">10.1094/MPMI-20-8-0887</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Iowa</li></region><settlement><li>Ames (Iowa)</li></settlement><orgName><li>Université d'État de l'Iowa</li></orgName></list><tree><noCountry><name sortKey="Abdelnoor, Ricardo V" sort="Abdelnoor, Ricardo V" uniqKey="Abdelnoor R" first="Ricardo V" last="Abdelnoor">Ricardo V. Abdelnoor</name><name sortKey="Almeida, Alvaro M R" sort="Almeida, Alvaro M R" uniqKey="Almeida A" first="Alvaro M R" last="Almeida">Alvaro M R. Almeida</name><name sortKey="Baum, Thomas J" sort="Baum, Thomas J" uniqKey="Baum T" first="Thomas J" last="Baum">Thomas J. Baum</name><name sortKey="Dittman, Jaime D" sort="Dittman, Jaime D" uniqKey="Dittman J" first="Jaime D" last="Dittman">Jaime D. Dittman</name><name sortKey="Godoy, Claudia V" sort="Godoy, Claudia V" uniqKey="Godoy C" first="Cláudia V" last="Godoy">Cláudia V. Godoy</name><name sortKey="Graham, Michelle A" sort="Graham, Michelle A" uniqKey="Graham M" first="Michelle A" last="Graham">Michelle A. Graham</name><name sortKey="Nelson, Rex T" sort="Nelson, Rex T" uniqKey="Nelson R" first="Rex T" last="Nelson">Rex T. Nelson</name><name sortKey="Nettleton, Dan" sort="Nettleton, Dan" uniqKey="Nettleton D" first="Dan" last="Nettleton">Dan Nettleton</name><name sortKey="Recknor, Justin C" sort="Recknor, Justin C" uniqKey="Recknor J" first="Justin C" last="Recknor">Justin C. Recknor</name><name sortKey="Whitham, Steven A" sort="Whitham, Steven A" uniqKey="Whitham S" first="Steven A" last="Whitham">Steven A. Whitham</name></noCountry><country name="États-Unis"><region name="Iowa"><name sortKey="Van De Mortel, Martijn" sort="Van De Mortel, Martijn" uniqKey="Van De Mortel M" first="Martijn" last="Van De Mortel">Martijn Van De Mortel</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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